Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846307.1_cds_XP_016509591.1_22511
CDS Infomation

[gene=LOC107827047] [db_xref=GeneID:107827047] [protein=hydroxymethylglutaryl-CoA lyase, mitochondrial-like] [protein_id=XP_016509591.1] [location=complement(join(5402..5647,7810..7925,9048..9184,9562..9725,9855..9935,11556..11735,11924..12095,13128..13246))] [gbkey=CDS]
Sequence

ATGTTAGCTTATAAAATCATCAAGAAAACATTAAGATGGAACTATATTTTGTTAGCAAGT
CGATCCTTTTCTGTTGTGACGAGTGAAGCAGACAACATTTTGTCCCTAATTAATATGAGC
AATGACATTGAAGGGGGAGCATTCCAATTGCGAAGACAAATGAGAAGGGATTCATTATGT
AATTCTTTGTTTAATCAAGATCATAGGGTGGTTAGAACGAGTATCGGATCTTTTTCTTTG
TCAAATTGTTATTACAGCAGCCATGGATATTTAAAAGACGTCAAAGACAAGTCCTTAGGA
TCTGTCCCTGAAGTTGTCAAGATAGTAGAAGTTGGCCCAAGAGATGGTCTACAAAATGAG
AAGACGATAGTACCTACAGAAGTGAAGGTGGAGCTTATTAAATTACTTGTTTCTAGTGGA
CTGCCAGTTGTTGAGGCTACTAGTTTTGTGTCTCCAAAGTGGGTACCACAGCTAGCTGAT
GCAAAGGATGTAATTGAAGCAGTTAAGAGTCTTACAGGGGTCCGCTTACCTGTTTTGACA
CCGAATCTTAAAGGTTTTGAAGCAGCTGTTGCAGCTGGAGCCAAGGAAGTGGCAATCTTT
GCCGCAGCATCCGAGTCCTTTTCTAGGTCTAACATAAATTGCAGCATTGAAGACAGTCTT
GCTCGTTATCGTGATGTTGCTCTTGCAGCCAAAAACCATTCCATCCCCATTCGTGGGTAT
ATATCATGTGTTGTTGGCTGTCCCGTAGAAGGAGCAGTGTCTCCATCAAAAGTTGCATAT
GTGGCTAAAGAACTGGTAGATATGGGTTGCTTTGAAATTTCTCTTGGTGATACAATTGGA
GTTGGTACTCCAGGTACTGTTATTCCAATGCTTGACGCTGTAACCCAAGTTGTCCCAGTA
GAGAGGCTTGCTGTTCATTTTCATGACACTTATGGACAAGCTCTTTCCAACATTATTGTG
TCGTTGCAAATGGGGATCAGCACAGTGGATTCATCTGTATCAGGCCTTGGGGGTTGTCCA
TATGCTAAAGGTGCCTCGGGTAATGTGGCTACGGAGGATGTCGTTTACATGCTCAATGGA
CTAGGAGTGAAGACAAATGTGGATATGAGAAAGCTTCTATCGGCTGGAGATTTCATCTGC
AAACATTTGGGTCGCCCTTCTGGTTCTAAGGCTGCTATTGCATTGAGTAGAACATCTACT
GCTTCAAAGCTGTAA

Peptide Sequence

PEP ID

XP_016509591.1
PEP Infomation

PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like [Nicotiana tabacum]
Sequence

MLAYKIIKKTLRWNYILLASRSFSVVTSEADNILSLINMSNDIEGGAFQLRRQMRRDSLC
NSLFNQDHRVVRTSIGSFSLSNCYYSSHGYLKDVKDKSLGSVPEVVKIVEVGPRDGLQNE
KTIVPTEVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVIEAVKSLTGVRLPVLT
PNLKGFEAAVAAGAKEVAIFAAASESFSRSNINCSIEDSLARYRDVALAAKNHSIPIRGY
ISCVVGCPVEGAVSPSKVAYVAKELVDMGCFEISLGDTIGVGTPGTVIPMLDAVTQVVPV
ERLAVHFHDTYGQALSNIIVSLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNG
LGVKTNVDMRKLLSAGDFICKHLGRPSGSKAAIALSRTSTASKL

Transcript Sequence

Gene sequence data has not been registered.